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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917888.1_cds_XP_016467431.1_60180
CDS Infomation

[gene=LOC107790047] [db_xref=GeneID:107790047] [protein=probable 2-oxoglutarate/Fe(II)-dependent dioxygenase] [protein_id=XP_016467431.1] [location=join(3712..4187,4812..5139,5225..5479)] [gbkey=CDS]
Sequence

ATGGAAAAAGTTGACTCAGCTTTCATCCAAGATGTTGAACACAGGCCTAAATTCACCATA
ACTGAAGCAGAGAGCATTCCAGTGATTGATCTCTTAATACTCAACTCTTCAGATTTCTCC
ACTGAGAAAAATTGCAAGGAATTATCAAGTCTAGTAGCTGAGGTGAAAGATGCATGCAAG
AAATGGGGATTCTTCCAAGTGATCAATCATGGGGTGTCAGAGTACAGGGAAAAGATTGAG
TTGGGATCAAGAAAGTTCTTTGCTTTGCCTAAAGAGGAAAAGAGAAAAGTGAAGAGAGAT
GAGCTGAATTCAATGGGATATTATGATACTGAGCTCACCAAAAATGTTAGGGACTGGAAA
GAAGTCTTTGATTTTACTGTGGAGAATCCAACTGTTGTACCACTTTCTCATGACCCTGAT
GACAAGGAGCTCAAGGAGTTGCACAATCAATGGCCTGAGTACCCTCCCGAATTAAGGGAT
GTTTGTGAAAAGTATGTTCAAGAAATGCAAAAGTTGTCTTACAAGTTACTAGAACTGATT
TCTCTCAGCTTAGACTTGCCAGCAAAAAGGTTGAATGGGTTCTTTAAAAACCAAACTAGT
TTCGCGAGGCTGAATCATTATCCTCCTTGCCCTATCCCTCATTTGGCTTTAGGAGTGGGT
AGGCACAAAGATGCTGGTGCACTCACCATTCTTGCTCAAGATGATATTGGAGGGCTTGAA
GTAAAGAGGAAAACTGATGGTGAATGGATTAGAGTTAAACCTACTCTTGATGCTTACATT
ATAAATGTTGGTGACGCTATCCAGGTTTGGAGCAACAATGAATATGAGAGCGTGGAACAC
CGGGTGGTGGTGAACTCTGAGAAGGAAAGGTTTTCAATTCCATTCTTCCTCAATCCATCA
CACTATACTTGGATAGGACCCTTGGAGGAGCTCGTCAATGAGAAGAACCCTGCAAAATAT
AAGGCCTATAACTGGGGAATGCTTTTCGCTCATCGGAAGAACAGCAATTTCAAGAAACGT
GATGATGAAAACCTTGAAATTCACCATTTCAAGGCTTGA

Peptide Sequence

PEP ID

XP_016467431.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Nicotiana tabacum]
Sequence

MEKVDSAFIQDVEHRPKFTITEAESIPVIDLLILNSSDFSTEKNCKELSSLVAEVKDACK
KWGFFQVINHGVSEYREKIELGSRKFFALPKEEKRKVKRDELNSMGYYDTELTKNVRDWK
EVFDFTVENPTVVPLSHDPDDKELKELHNQWPEYPPELRDVCEKYVQEMQKLSYKLLELI
SLSLDLPAKRLNGFFKNQTSFARLNHYPPCPIPHLALGVGRHKDAGALTILAQDDIGGLE
VKRKTDGEWIRVKPTLDAYIINVGDAIQVWSNNEYESVEHRVVVNSEKERFSIPFFLNPS
HYTWIGPLEELVNEKNPAKYKAYNWGMLFAHRKNSNFKKRDDENLEIHHFKA

Transcript Sequence

Gene sequence data has not been registered.